8CKB: Asymmetric reconstruction of the crAss001 virion

PDB ID: 8CKBDownload
MMDB ID: 243883
PDB Deposition Date: 2023/2/16
Updated in MMDB: 2024/03
Experimental Method:
electron microscopy
Resolution: 4.39  Å
Source Organism:
Similar Structures:
Biological Unit for 8CKB: 1445-meric; determined by author
Molecular Components in 8CKB
Label Count Molecule
Proteins (1445 molecules)
…
 534
Auxiliary Capsid Protein Gp36
Molecule annotation
1
Head Fiber Dimer Protein Gp29
Molecule annotation
…
 110
Head Fiber Dimer Protein Gp29
Molecule annotation
…
 75
Head Fiber Trimer Protein Gp21
Molecule annotation
6
Muzzle Bound Helix
Molecule annotation
…
 535
Major Capsid Protein Gp32
Molecule annotation
6
Muzzle Protein Gp44
Molecule annotation
24
Cargo Protein 1 Gp45
Molecule annotation
12
Portal Protein Gp20
Molecule annotation
10
Portal Vertex Capsid Protein Gp57
Molecule annotation
12
Ring Protein 1 Gp43
Molecule annotation
12
Ring Protein 2 Gp40
Molecule annotation
12
Ring Protein 3 Gp35
Molecule annotation
24
Ring Protein 4/5 Gp34
Molecule annotation
…
 36
Tail Fiber Protein Gp22
Molecule annotation
24
Tail HUB Protein a Gp38
Molecule annotation
12
Tail HUB Protein B Gp39
Molecule annotation
Chemicals and Non-standard biopolymers (82 molecules)
1
82
MAGNESIUM ION (Link to PubChem not yet available)MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303