8CG9: Crystal structure of human DNA cross-link repair 1A in complex with a cyclic N-hydroxyurea inhibitor

PDB ID: 8CG9Download
MMDB ID: 242927
PDB Deposition Date: 2023/2/3
Updated in MMDB: 2024/09
Experimental Method:
x-ray diffraction
Resolution: 1.68  Å
Source Organism:
Similar Structures:
Biological Unit for 8CG9: monomeric; determined by author
Molecular Components in 8CG9
Label Count Molecule
Protein (1 molecule)
1
DNA Cross-link Repair 1A Protein
(Gene symbol: DCLRE1A)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
1
NICKEL (II) IONNICKEL (II) ION
2
1
1-[[(3~{R})-2,3-dihydro-1,4-benzodioxin-3-yl]methyl]-3-oxidanyl-thieno[3,2-d]pyrimidine-2,4-dione1-[[(3~{R})-2,3-dihydro-1,4-benzodioxin-3-yl]methyl]-3-oxidanyl-thieno[3,2-d]pyrimidine-2,4-dione
3
1
1-[(2S)-2,3-dihydro-1,4-benzodioxin-2-ylmethyl]-3-hydroxythieno[3,2-d]pyrimidine-2,4(1H,3H)-dione1-[(2S)-2,3-dihydro-1,4-benzodioxin-2-ylmethyl]-3-hydroxythieno[3,2-d]pyrimidine-2,4(1H,3H)-dione
4
1
ZINC IONZINC ION
5
1
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303