8BR1: ExoY Nucleotidyl Cyclase domain from Vibrio nigripulchritudo MARTX toxin, bound to Latrunculin-B-ATP-Mg-actin, and 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE and 2 Mg ions

PDB ID: 8BR1Download
MMDB ID: 235738
PDB Deposition Date: 2022/11/22
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.044  Å
Source Organism:
Vibrio nigripulchritudo▼
Similar Structures:
Biological Unit for 8BR1: dimeric; determined by author and by software (PISA)
Molecular Components in 8BR1
Label Count Molecule
Proteins (2 molecules)
1
Actin, Alpha Skeletal Muscle, Intermediate Form
Molecule annotation
1
Putative Adenylate Cyclase
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
LATRUNCULIN BLATRUNCULIN B
2
1
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
3
1
3'-DEOXYADENOSINE-5'-TRIPHOSPHATE3'-DEOXYADENOSINE-5'-TRIPHOSPHATE
4
2
MAGNESIUM IONMAGNESIUM ION
5
1
SULFATE IONSULFATE ION
6
1
GLYCEROLGLYCEROL
7
1
HYDROGEN PEROXIDEHYDROGEN PEROXIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303