8BO1: ExoY Nucleotidyl Cyclase domain from Vibrio nigripulchritudo MARTX toxin, bound to Latrunculin-B-ATP-Mg-actin, and 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE and 2 Mg ions

PDB ID: 8BO1Download
MMDB ID: 235736
PDB Deposition Date: 2022/11/14
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.501  Å
Source Organism:
Vibrio nigripulchritudo▼
Similar Structures:
Biological Unit for 8BO1: dimeric; determined by author and by software (PISA)
Molecular Components in 8BO1
Label Count Molecule
Proteins (2 molecules)
1
Actin, Alpha Skeletal Muscle, Intermediate Form
Molecule annotation
1
Putative Adenylate Cyclase
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
1
LATRUNCULIN BLATRUNCULIN B
2
1
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
3
3
MAGNESIUM IONMAGNESIUM ION
4
1
SULFATE IONSULFATE ION
5
1
3'-DEOXYADENOSINE-5'-TRIPHOSPHATE3'-DEOXYADENOSINE-5'-TRIPHOSPHATE
6
2
MANGANESE (II) IONMANGANESE (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303