8B56: Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the inhibitor GD-9

PDB ID: 8B56Download
MMDB ID: 233772
PDB Deposition Date: 2022/9/21
Updated in MMDB: 2023/08
Experimental Method:
x-ray diffraction
Resolution: 1.823  Å
Source Organism:
Similar Structures:
Biological Unit for 8B56: monomeric; determined by author
Molecular Components in 8B56
Label Count Molecule
Protein (1 molecule)
1
3c-like Proteinase Nsp5
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
(2~{S})-4-(2-chloranylethanoyl)-1-(3,4-dichlorophenyl)-~{N}-(thiophen-2-ylmethyl)piperazine-2-carboxamide(2~{S})-4-(2-chloranylethanoyl)-1-(3,4-dichlorophenyl)-~{N}-(thiophen-2-ylmethyl)piperazine-2-carboxamide
2
2
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303