8B01: Cryo-EM structure of the Tripartite ATP-independent Periplasmic (TRAP) transporter SiaQM from Photobacterium profundum in a nanodisc

PDB ID: 8B01Download
MMDB ID: 227806
PDB Deposition Date: 2022/9/6
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.03  Å
Source Organism:
Photobacterium profundum SS9▼
Similar Structures:
Biological Unit for 8B01: trimeric; determined by author and by software (PISA)
Molecular Components in 8B01
Label Count Molecule
Proteins (3 molecules)
1
Putative Trap-type C4-dicarboxylate Transport System, Small Permease Component
Molecule annotation
1
Putative Trap-type C4-dicarboxylate Transport System, Large Permease Component
Molecule annotation
1
Megabody C7hopq
Molecule annotation
Chemicals and Non-standard biopolymers (15 molecules)
1
6
N-OCTANEN-OCTANE
2
2
PHOSPHATIDYLETHANOLAMINEPHOSPHATIDYLETHANOLAMINE
3
1
DOCOSANEDOCOSANE
4
2
DECANEDECANE
5
2
SODIUM IONSODIUM ION
6
1
TRIDECANETRIDECANE
7
1
HEXANEHEXANE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303