8APO: Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites

PDB ID: 8APODownload
MMDB ID: 241208
PDB Deposition Date: 2022/8/10
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 3.2  Å
Source Organism:
Similar Structures:
Biological Unit for 8APO: 122-meric; determined by author
Molecular Components in 8APO
Label Count Molecule
Proteins (106 molecules)
1
Ul2m
Molecule annotation
1
Ul3m
Molecule annotation
1
Ul4m
Molecule annotation
1
Ul5m
Molecule annotation
1
Ul6m
Molecule annotation
1
Ul9m
Molecule annotation
1
Ul13m
Molecule annotation
1
Ul14m
Molecule annotation
1
Ul15m
Molecule annotation
1
Ul16m
Molecule annotation
1
Bl17m
Molecule annotation
1
Ul18m
Molecule annotation
1
Bl19m
Molecule annotation
1
Bl20m
Molecule annotation
1
Bl21m
Molecule annotation
1
Ul22m
Molecule annotation
1
Ul23m
Molecule annotation
1
Bl24m
Molecule annotation
1
Bl25m
Molecule annotation
1
Bl27m
Molecule annotation
1
Bl28m
Molecule annotation
1
Ul29m
Molecule annotation
1
Ul30m
Molecule annotation
1
Bl31m
Molecule annotation
1
Bl32m
Molecule annotation
1
Bl33m
Molecule annotation
1
Bl34m
Molecule annotation
1
Bl35m
Molecule annotation
1
Bl36m
Molecule annotation
1
Ml40
Molecule annotation
1
Ml41
Molecule annotation
1
Ml43
Molecule annotation
1
Ml46
Molecule annotation
1
Ml63
Molecule annotation
1
Ml64
Molecule annotation
1
Ml87
Molecule annotation
3
Ml116
Molecule annotation
1
Ml118
Molecule annotation
1
Ml120
Molecule annotation
1
Ml121
Molecule annotation
1
Ml122
Molecule annotation
1
Ml123
Molecule annotation
1
Ml124
Molecule annotation
1
Ml125
Molecule annotation
1
Ml126
Molecule annotation
1
Ml127
Molecule annotation
1
Ml128
Molecule annotation
1
Ml129
Molecule annotation
1
Bs1m
Molecule annotation
1
Us2m
Molecule annotation
1
Us3m
Molecule annotation
1
Us4m
Molecule annotation
1
Us5m
Molecule annotation
1
Us6m
Molecule annotation
1
Us7m
Molecule annotation
1
Us8m
Molecule annotation
1
Us9m
Molecule annotation
1
Us10m
Molecule annotation
1
Us11m
Molecule annotation
1
Us12m
Molecule annotation
1
Us13m
Molecule annotation
1
Us14m
Molecule annotation
1
Us15m
Molecule annotation
1
Bs16m
Molecule annotation
1
Us17m
Molecule annotation
1
Bs18m
Molecule annotation
1
Bs19m
Molecule annotation
1
Bs21m
Molecule annotation
1
Ms23
Molecule annotation
1
Ms26
Molecule annotation
1
Ms29
Molecule annotation
1
Ms31
Molecule annotation
1
Ms33
Molecule annotation
1
Ms34
Molecule annotation
1
Ms35
Molecule annotation
1
Ms37
Molecule annotation
1
Ms38
Molecule annotation
1
Ms45
Molecule annotation
1
Ms106
Molecule annotation
1
Ms107
Molecule annotation
1
Us4m-2
Molecule annotation
1
Ms108
Molecule annotation
1
Ms109
Molecule annotation
1
Ms110
Molecule annotation
1
Us3m-2
Molecule annotation
1
Ms111
Molecule annotation
1
Ms112
Molecule annotation
1
Ms113
Molecule annotation
1
Ms114
Molecule annotation
1
Ms115
Molecule annotation
1
Ms116
Molecule annotation
1
Us7m-2
Molecule annotation
1
Ml105
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
1
Unknown
Molecule annotation
Nucleotides(16 molecules)
1
Mtlsu-1
Molecule annotation
1
Mtlsu-2
Molecule annotation
1
Mtlsu-3
Molecule annotation
1
Mtlsu-4
Molecule annotation
1
Mtlsu-5
Molecule annotation
1
Mtlsu-6
Molecule annotation
1
Mtlsu-7
Molecule annotation
1
Mtlsu-8
Molecule annotation
1
Mt-5s
Molecule annotation
1
Mtssu-1
Molecule annotation
1
Mtssu-2
Molecule annotation
1
Mtssu-3
Molecule annotation
1
Mtssu-4
Molecule annotation
1
P-site tRNA Anticodon Loop
Molecule annotation
1
A-site tRNA Anticodon Loop
Molecule annotation
1
mRNA
Molecule annotation
Chemicals and Non-standard biopolymers (144 molecules)
112
30
1
1
* Click molecule labels to explore molecular sequence information.

Citing MMDB