8A1Y: Sodium pumping NADH-quinone oxidoreductase with inhibitor HQNO

PDB ID: 8A1YDownload
MMDB ID: 231589
PDB Deposition Date: 2022/6/2
Updated in MMDB: 2023/11
Experimental Method:
electron microscopy
Resolution: 3.3  Å
Source Organism:
Similar Structures:
Biological Unit for 8A1Y: hexameric; determined by author
Molecular Components in 8A1Y
Label Count Molecule
Proteins (6 molecules)
1
Na(+)-translocating Nadh-quinone Reductase Subunit a
Molecule annotation
1
Na(+)-translocating Nadh-quinone Reductase Subunit B
Molecule annotation
1
Na(+)-translocating Nadh-quinone Reductase Subunit C
Molecule annotation
1
Na(+)-translocating Nadh-quinone Reductase Subunit D
Molecule annotation
1
Na(+)-translocating Nadh-quinone Reductase Subunit E
Molecule annotation
1
Na(+)-translocating Nadh-quinone Reductase Subunit F
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
2
FLAVIN MONONUCLEOTIDEFLAVIN MONONUCLEOTIDE
2
1
RIBOFLAVINRIBOFLAVIN
3
3
1,2-Distearoyl-sn-glycerophosphoethanolamine1,2-Distearoyl-sn-glycerophosphoethanolamine
4
4
DODECYL-BETA-D-MALTOSIDEDODECYL-BETA-D-MALTOSIDE
5
1
2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE
6
2
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
7
1
FLAVIN-ADENINE DINUCLEOTIDEFLAVIN-ADENINE DINUCLEOTIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303