7YVW: NMR determination of the 2:1 binding motif structure involving cytosine flipping out for the recognition of the CGG/CGG triad DNA

PDB ID: 7YVWDownload
MMDB ID: 231559
PDB Deposition Date: 2022/8/19
Updated in MMDB: 2023/06
Experimental Method:
solution nmr
Source Organism:
Biological Unit for 7YVW: dimeric; determined by author
Molecular Components in 7YVW
Label Count Molecule
Nucleotides(2 molecules)
1
DNA (5'-d(*cp*tp*ap*ap*cp*gp*gp*ap*ap*tp*g)-3')
Molecule annotation
1
DNA (5'-d(*cp*ap*tp*tp*cp*gp*gp*tp*tp*ap*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
3-[3-[(7-methyl-1,8-naphthyridin-2-yl)carbamoyloxy]propylamino]propyl ~{N}-(7-methyl-1,8-naphthyridin-2-yl)carbamate3-[3-[(7-methyl-1,8-naphthyridin-2-yl)carbamoyloxy]propylamino]propyl ~{N}-(7-methyl-1,8-naphthyridin-2-yl)carbamate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303