7YFH: Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine, glutamate and (R)-PYD-106

PDB ID: 7YFHDownload
MMDB ID: 228352
PDB Deposition Date: 2022/7/8
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3  Å
Source Organism:
Similar Structures:
Biological Unit for 7YFH: tetrameric; determined by author
Molecular Components in 7YFH
Label Count Molecule
Proteins (4 molecules)
2
Glutamate Receptor Ionotropic, Nmda 1
(Gene symbol: Grin1)
Molecule annotation
2
Glutamate Receptor Ionotropic, Nmda 2C
(Gene symbol: Grin2c)
Molecule annotation
Chemicals and Non-standard biopolymers (57 molecules)
1
47
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
5
alpha-D-mannopyranosealpha-D-mannopyranose
3
2
GLYCINEGLYCINE
4
2
GLUTAMIC ACIDGLUTAMIC ACID
5
1
methyl 4-[(2~{R})-3-ethanoyl-1-[2-(2-methyl-1~{H}-indol-3-yl)ethyl]-4-oxidanyl-5-oxidanylidene-2~{H}-pyrrol-2-yl]benzoatemethyl 4-[(2~{R})-3-ethanoyl-1-[2-(2-methyl-1~{H}-indol-3-yl)ethyl]-4-oxidanyl-5-oxidanylidene-2~{H}-pyrrol-2-yl]benzoate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303