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7YDX:
Crystal structure of human RIPK1 kinase domain in complex with compound RI-962
PDB ID:
7YDX
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MMDB ID:
229133
PDB Deposition Date:
2022/7/4
Updated in MMDB:
2023/12
Experimental Method:
x-ray diffraction
Resolution:
2.642 Å
Source Organism:
Homo sapiens
Similar Structures:
VAST+
Download sequence data
Biological Unit for 7YDX: dimeric; determined by author and by software (PISA)
Molecular Components in 7YDX
Label
Count
Molecule
Proteins (2 molecules)
A
B_0
2
Receptor-interacting Serine/threonine-protein Kinase 1
(Gene symbol:
RIPK1
)
Chemicals and Non-standard biopolymers (9 molecules)
1
2
1-methyl-5-[2-(2-methylpropanoylamino)-[1,2,4]triazolo[1,5-a]pyridin-7-yl]-N-[(1S)-1-phenylethyl]indole-3-carboxamide
2
7
IODIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303