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7YBC:
Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with (S)-4-hydroxy-4-methyl-2-oxoglutarate and factor X-derived peptide (39mer-4Ser)
PDB ID:
7YBC
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MMDB ID:
232300
PDB Deposition Date:
2022/6/29
Updated in MMDB:
2023/12
Experimental Method:
x-ray diffraction
Resolution:
1.84 Å
Source Organism:
synthetic construct
▼
Taxonomy
Molecule
synthetic construct
B
Homo sapiens
A
Similar Structures:
VAST+
Download sequence data
Biological Unit for 7YBC: dimeric; determined by author and by software (PISA)
Molecular Components in 7YBC
Label
Count
Molecule
Proteins (2 molecules)
A
1
Aspartyl/asparaginyl Beta-hydroxylase
B
1
Coagulation Factor X
Chemicals and Non-standard biopolymers (3 molecules)
1
1
MANGANESE (II) ION
2
1
GLYCEROL
3
1
(2~{S})-2-methyl-2-oxidanyl-4-oxidanylidene-pentanedioic acid
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303