7YB8: Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-2-hydroxyglutarate and factor X-derived peptide (39mer-4Ser)

PDB ID: 7YB8Download
MMDB ID: 232296
PDB Deposition Date: 2022/6/29
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.98  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 7YB8: dimeric; determined by author and by software (PISA)
Molecular Components in 7YB8
Label Count Molecule
Proteins (2 molecules)
1
Aspartyl/asparaginyl Beta-hydroxylase
Molecule annotation
1
Coagulation Factor X
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
2
GLYCEROLGLYCEROL
2
1
MANGANESE (II) IONMANGANESE (II) ION
3
1
(2R)-2-hydroxypentanedioic acid(2R)-2-hydroxypentanedioic acid
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303