7Y3H: Crystal Structure of Diels-Alderase ApiI in complex with SAM and product

PDB ID: 7Y3HDownload
MMDB ID: 231540
PDB Deposition Date: 2022/6/10
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.97  Å
Source Organism:
Similar Structures:
Biological Unit for 7Y3H: monomeric; determined by author and by software (PISA)
Molecular Components in 7Y3H
Label Count Molecule
Protein (1 molecule)
1
Apii
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
1
S-ADENOSYLMETHIONINES-ADENOSYLMETHIONINE
2
6
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
1
3-[[(1R,2R,4aS,8aR)-2-methyl-1,2,4a,5,6,7,8,8a-octahydronaphthalen-1-yl]carbonyl]-5-(4-hydroxyphenyl)-4-oxidanyl-1H-pyridin-2-one3-[[(1R,2R,4aS,8aR)-2-methyl-1,2,4a,5,6,7,8,8a-octahydronaphthalen-1-yl]carbonyl]-5-(4-hydroxyphenyl)-4-oxidanyl-1H-pyridin-2-one
4
1
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303