7XYL: E426Q-glycine-glycylthricin complex

PDB ID: 7XYLDownload
MMDB ID: 230731
PDB Deposition Date: 2022/6/1
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.099  Å
Source Organism:
Similar Structures:
Biological Unit for 7XYL: tetrameric; determined by author and by software (PISA)
Molecular Components in 7XYL
Label Count Molecule
Proteins (4 molecules)
4
N-formimidoyl Fortimicin a Synthase
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
4
FLAVIN-ADENINE DINUCLEOTIDEFLAVIN-ADENINE DINUCLEOTIDE
2
4
GLYCINEGLYCINE
3
4
[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303