7W1M: Cryo-EM structure of human cohesin-CTCF-DNA complex

PDB ID: 7W1MDownload
MMDB ID: 230690
PDB Deposition Date: 2021/11/19
Updated in MMDB: 2023/12
Experimental Method:
electron microscopy
Resolution: 6.5  Å
Source Organism:
Similar Structures:
Biological Unit for 7W1M: octameric; determined by author
Molecular Components in 7W1M
Label Count Molecule
Proteins (6 molecules)
1
Structural Maintenance of Chromosomes Protein 1A
(Gene symbol: SMC1A)
Molecule annotation
1
Structural Maintenance of Chromosomes Protein 3
(Gene symbol: SMC3)
Molecule annotation
1
Double-strand-break Repair Protein Rad21 Homolog
(Gene symbol: RAD21)
Molecule annotation
1
Cohesin Subunit Sa-1
(Gene symbol: STAG1)
Molecule annotation
1
Nipped-b-like Protein
(Gene symbol: NIPBL)
Molecule annotation
1
Transcriptional Repressor Ctcf
(Gene symbol: CTCF)
Molecule annotation
Nucleotides(2 molecules)
1
DNA (118-mer)
Molecule annotation
1
DNA (118-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (15 molecules)
1
2
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
2
2
BERYLLIUM TRIFLUORIDE IONBERYLLIUM TRIFLUORIDE ION
3
11
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303