7UV6: Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and scaffold duplex (21mer) containing the cognate REPE54 sequence and an insert duplex (10mer) with guest TAMRA-labelled thymine and G-C rich sequence

PDB ID: 7UV6Download
MMDB ID: 229667
PDB Deposition Date: 2022/4/29
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.72  Å
Source Organism:
Escherichia coli K-12▼
Similar Structures:
Biological Unit for 7UV6: pentameric; determined by author
Molecular Components in 7UV6
Label Count Molecule
Protein (1 molecule)
1
Replication Initiation Protein
Molecule annotation
Nucleotides(4 molecules)
1
DNA (5'-d(*ap*cp*cp*tp*gp*tp*gp*ap*cp*ap*ap*ap*tp*tp*gp*cp*cp*cp*tp*cp*a)-3')
Molecule annotation
1
DNA (5'-d(*tp*cp*tp*gp*ap*gp*gp*gp*cp*ap*ap*tp*tp*tp*gp*tp*cp*ap*cp*ap*g)-3')
Molecule annotation
1
DNA (5'-d(*gp*ap*cp*gp*gp*cp*cp*cp*gp*g)-3')
Molecule annotation
1
DNA (5'-d(*gp*t(tamra)p*cp*cp*gp*gp*gp*cp*cp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
5
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303