7TXD: Cryo-EM structure of BG505 SOSIP HIV-1 Env trimer in complex with CD4 receptor (D1D2) and broadly neutralizing darpin bnD.9

PDB ID: 7TXDDownload
MMDB ID: 228837
PDB Deposition Date: 2022/2/8
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 3.87  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 7TXD: dodecameric; determined by author
Molecular Components in 7TXD
Label Count Molecule
Proteins (12 molecules)
3
Envelope Glycoprotein Gp120
Molecule annotation
3
Envelope Glycoprotein Gp41
Molecule annotation
3
T-cell Surface Glycoprotein CD4
Molecule annotation
3
Broadly Neutralizing Darpin Bnd.9
Molecule annotation
Chemicals and Non-standard biopolymers (95 molecules)
1
74
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
11
beta-D-mannopyranosebeta-D-mannopyranose
3
10
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303