7ORB: Crystal structure of the L452R mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-75 and COVOX-253 Fabs

PDB ID: 7ORBDownload
MMDB ID: 204218
PDB Deposition Date: 2021/6/4
Updated in MMDB: 2021/08
Experimental Method:
x-ray diffraction
Resolution: 2.5  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 7ORB: pentameric; determined by author
Molecular Components in 7ORB
Label Count Molecule
Proteins (5 molecules)
1
Spike Protein S1
Molecule annotation
1
Covox-253 FAB Heavy Chain
Molecule annotation
1
Covox-253 FAB Light Chain
Molecule annotation
1
Covox-75 FAB Heavy Chain
Molecule annotation
1
Covox-75 FAB Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
alpha-L-fucopyranosealpha-L-fucopyranose
3
9
GLYCEROLGLYCEROL
4
1
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
5
1
CHLORIDE IONCHLORIDE ION
6
1
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
7
1
PHOSPHATE IONPHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303