7NXD: Cryo-EM structure of human integrin alpha5beta1 in the half-bent conformation

PDB ID: 7NXDDownload
MMDB ID: 205942
PDB Deposition Date: 2021/3/18
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 4.6  Å
Source Organism:
Similar Structures:
Biological Unit for 7NXD: dimeric; determined by author and by software (PISA)
Molecular Components in 7NXD
Label Count Molecule
Proteins (2 molecules)
1
Integrin Alpha-5
(Gene symbol: ITGA5)
Molecule annotation
1
Integrin Beta-1
(Gene symbol: ITGB1)
Molecule annotation
Chemicals and Non-standard biopolymers (48 molecules)
1
30
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
7
beta-D-mannopyranosebeta-D-mannopyranose
3
3
alpha-D-mannopyranosealpha-D-mannopyranose
4
7
CALCIUM IONCALCIUM ION
5
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303