7NBF: Crystal structure of human serine racemase in complex with DSiP fragment Z126932614, XChem fragment screen

PDB ID: 7NBFDownload
MMDB ID: 199469
PDB Deposition Date: 2021
Updated in MMDB: 2021/03
Experimental Method:
x-ray diffraction
Resolution: 1.6  Å
Source Organism:
Similar Structures:
Biological Unit for 7NBF: dimeric; determined by author and by software (PISA)
Molecular Components in 7NBF
Label Count Molecule
Proteins (2 molecules)
2
Serine Racemase
(Gene symbol: SRR)
Molecule annotation
Chemicals and Non-standard biopolymers (21 molecules)
1
2
PYRIDOXAL-5'-PHOSPHATEPYRIDOXAL-5'-PHOSPHATE
2
7
GLYCEROLGLYCEROL
3
3
CALCIUM IONCALCIUM ION
4
1
MAGNESIUM IONMAGNESIUM ION
5
1
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
6
2
2-[(methylsulfonyl)methyl]-1H-benzimidazole2-[(methylsulfonyl)methyl]-1H-benzimidazole
7
1
SODIUM IONSODIUM ION
8
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
9
1
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
10
1
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303