7L7X: X-ray structure of the Pcryo_0638 aminotransferase from Psychrobacter cryohalolentis

PDB ID: 7L7XDownload
MMDB ID: 199443
PDB Deposition Date: 2020/12/30
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.3  Å
Source Organism:
Similar Structures:
Biological Unit for 7L7X: dimeric; determined by author and by software (PISA)
Molecular Components in 7L7X
Label Count Molecule
Proteins (2 molecules)
2
Degt/dnrj/eryc1/strs Aminotransferase
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
2
4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
2
2
[(2R,3R,4R,5S,6R)-3-acetamido-6-methyl-5-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-4-oxidanyl-oxan-2-yl] [[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate[(2R,3R,4R,5S,6R)-3-acetamido-6-methyl-5-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-4-oxidanyl-oxan-2-yl] [[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate
3
10
1,2-ETHANEDIOL1,2-ETHANEDIOL
4
2
TETRAMETHYLAMMONIUM IONTETRAMETHYLAMMONIUM ION
5
2
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303