7L2D: Cryo-EM structure of NTD-directed neutralizing antibody 1-87 in complex with prefusion SARS-CoV-2 spike glycoprotein

PDB ID: 7L2DDownload
MMDB ID: 200192
PDB Deposition Date: 2020/12/16
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 3.55  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 7L2D: pentameric; determined by author
Molecular Components in 7L2D
Label Count Molecule
Proteins (5 molecules)
3
Spike Glycoprotein
Molecule annotation
1
1-87 Heavy Chain
Molecule annotation
1
1-87 Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (77 molecules)
1
74
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
3
beta-D-mannopyranosebeta-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303