7K96: Human DNA polymerase beta ternary complex with templating cytosine and incoming deoxyguanosine diphosphate

PDB ID: 7K96Download
MMDB ID: 198310
PDB Deposition Date: 2020/9/28
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.1  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 7K96: tetrameric; determined by author and by software (PISA)
Molecular Components in 7K96
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase Beta
Molecule annotation
Nucleotides(3 molecules)
1
DNA (5'-d(*cp*cp*gp*ap*cp*cp*gp*cp*gp*cp*ap*tp*cp*ap*gp*c)-3')
Molecule annotation
1
DNA (5'-d(*gp*cp*tp*gp*ap*tp*gp*cp*gp*c)-3')
Molecule annotation
1
DNA (5'-d(p*gp*tp*cp*gp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (21 molecules)
1
9
CHLORIDE IONCHLORIDE ION
2
4
SODIUM IONSODIUM ION
3
4
1,2-ETHANEDIOL1,2-ETHANEDIOL
4
3
CALCIUM IONCALCIUM ION
5
1
2'-DEOXYGUANOSINE-5'-DIPHOSPHATE2'-DEOXYGUANOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303