7JOM: Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with TO-317

PDB ID: 7JOMDownload
MMDB ID: 203184
PDB Deposition Date: 2020/8/6
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.84  Å
Source Organism:
Similar Structures:
Biological Unit for 7JOM: monomeric; determined by author
Molecular Components in 7JOM
Label Count Molecule
Protein (1 molecule)
1
Hdac6 Protein
(Gene symbol: hdac6)
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
1
N-hydroxy-4-({[(pyridin-3-yl)methyl][(2,3,4,5-tetrafluorophenyl)sulfonyl]amino}methyl)benzamideN-hydroxy-4-({[(pyridin-3-yl)methyl][(2,3,4,5-tetrafluorophenyl)sulfonyl]amino}methyl)benzamide
2
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
3
FORMIC ACIDFORMIC ACID
4
1
ZINC IONZINC ION
5
3
POTASSIUM IONPOTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303