7G39: Crystal Structure of rat Autotaxin in complex with 3-[(4-chloro-5-methyl-2-propan-2-ylphenoxy)methyl]-1H-indazole, i.e. SMILES C(C1=NNc2c1cccc2)Oc1cc(c(cc1C(C)C)Cl)C with IC50=0.065046 microM

PDB ID: 7G39Download
MMDB ID: 256674
PDB Deposition Date: 2023/6/5
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.98  Å
Source Organism:
Similar Structures:
Biological Unit for 7G39: monomeric; determined by author and by software (PISA)
Molecular Components in 7G39
Label Count Molecule
Protein (1 molecule)
1
Isoform 2 of Ectonucleotide Pyrophosphatase/phosphodiesterase Family Member 2
(Gene symbol: Enpp2)
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
5
alpha-D-mannopyranosealpha-D-mannopyranose
4
1
3-{[4-chloro-5-methyl-2-(propan-2-yl)phenoxy]methyl}-1H-indazole3-{[4-chloro-5-methyl-2-(propan-2-yl)phenoxy]methyl}-1H-indazole
5
1
POTASSIUM IONPOTASSIUM ION
6
1
ZINC IONZINC ION
7
1
SODIUM IONSODIUM ION
8
1
CALCIUM IONCALCIUM ION
9
1
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303