7F4Y: Crystal structure of replisomal dimer of DNA polymerase from bacteriophage RB69 with DNA duplexes

PDB ID: 7F4YDownload
MMDB ID: 204431
PDB Deposition Date: 2021/6/21
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 7F4Y: hexameric; determined by author and by software (PISA)
Molecular Components in 7F4Y
Label Count Molecule
Proteins (2 molecules)
2
DNA Polymerase
Molecule annotation
Nucleotides(4 molecules)
2
DNA (5'-d(*tp*cp*ap*ap*gp*tp*ap*ap*gp*cp*ap*gp*tp*cp*cp*gp*cp*tp*c)-3')
Molecule annotation
2
DNA (5'-d(*gp*ap*gp*cp*gp*gp*ap*cp*tp*gp*cp*tp*tp*ap*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE
2
2
CALCIUM IONCALCIUM ION
3
2
GUANOSINE-5'-MONOPHOSPHATEGUANOSINE-5'-MONOPHOSPHATE
4
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303