7DK1: Crystal structure of Zinc bound SARS-CoV-2 main protease

PDB ID: 7DK1Download
MMDB ID: 203742
PDB Deposition Date: 2020/11/22
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.902  Å
Source Organism:
Similar Structures:
Biological Unit for 7DK1: dimeric; determined by author and by software (PISA)
Molecular Components in 7DK1
Label Count Molecule
Proteins (2 molecules)
2
3c-like Proteinase
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
3
ZINC IONZINC ION
2
3
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
3
2
GLYCINEGLYCINE
4
1
CHLORIDE IONCHLORIDE ION
5
1
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303