7DFU: Crystal structure of Xanthomonas oryzae ClpP S68Y in complex with ADEP4

PDB ID: 7DFUDownload
MMDB ID: 202116
PDB Deposition Date: 2020/11/9
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 1.901  Å
Source Organism:
Similar Structures:
Biological Unit for 7DFU: heptameric; determined by author and by software (PISA)
Molecular Components in 7DFU
Label Count Molecule
Proteins (7 molecules)
7
Atp-dependent CLP Protease Proteolytic Subunit
Molecule annotation
Chemicals and Non-standard biopolymers (15 molecules)
1
7
N-[(6aS,12S,15aS,17R,21R,23aS)-17,21-dimethyl-6,11,15,20,23-pentaoxooctadecahydro-2H,6H,11H,15H-pyrido[2,1-i]dipyrrolo[2,1-c:2',1'-l][1,4,7,10,13]oxatetraazacyclohexadecin-12-yl]-3,5-difluoro-Nalpha-[(2E)-hept-2-enoyl]-L-phenylalaninamideN-[(6aS,12S,15aS,17R,21R,23aS)-17,21-dimethyl-6,11,15,20,23-pentaoxooctadecahydro-2H,6H,11H,15H-pyrido[2,1-i]dipyrrolo[2,1-c:2',1'-l][1,4,7,10,13]oxatetraazacyclohexadecin-12-yl]-3,5-difluoro-Nalpha-[(2E)-hept-2-enoyl]-L-phenylalaninamide
2
7
CHLORIDE IONCHLORIDE ION
3
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303