7DEO: Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv

PDB ID: 7DEODownload
MMDB ID: 200417
PDB Deposition Date: 2020/11/4
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.5  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 7DEO: dimeric; determined by author and by software (PISA)
Molecular Components in 7DEO
Label Count Molecule
Proteins (2 molecules)
1
Antibody Scfv
Molecule annotation
1
Spike Protein S1
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
CALCIUM IONCALCIUM ION
2
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303