7CYV: Crystal structure of FD20, a neutralizing single-chain variable fragment (scFv) in complex with SARS-CoV-2 Spike receptor-binding domain (RBD)

PDB ID: 7CYVDownload
MMDB ID: 206470
PDB Deposition Date: 2020/9/4
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 3.13  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 7CYV: dimeric; determined by author
Molecular Components in 7CYV
Label Count Molecule
Proteins (2 molecules)
1
the Heavy Chain Variable Region of the Scfv Fd20,the Light Chain Variable Region of the Scfv Fd20
Molecule annotation
1
Spike Protein S1
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
2
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
2
alpha-L-fucopyranosealpha-L-fucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303