7CL5: The crystal structure of KanJ in complex with kanamycin B and N-oxalylglycine

PDB ID: 7CL5Download
MMDB ID: 197558
PDB Deposition Date: 2020/7/20
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.5  Å
Source Organism:
Similar Structures:
Biological Unit for 7CL5: dimeric; determined by author
Molecular Components in 7CL5
Label Count Molecule
Proteins (2 molecules)
2
Kanamycin B Dioxygenase
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
NICKEL (II) IONNICKEL (II) ION
2
2
N-OXALYLGLYCINEN-OXALYLGLYCINE
3
2
(1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE(1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303