7C0F: Crystal structure of a dinucleotide-binding protein of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form I)

PDB ID: 7C0FDownload
MMDB ID: 199581
PDB Deposition Date: 2020/5/1
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.15  Å
Source Organism:
Similar Structures:
Biological Unit for 7C0F: monomeric; determined by author
Molecular Components in 7C0F
Label Count Molecule
Protein (1 molecule)
1
Sugar ABC Transporter, Periplasmic Sugar-binding Protein
(Gene symbol: TTHA0379)
Molecule annotation
Chemicals and Non-standard biopolymers (19 molecules)
1
1
CHLORIDE IONCHLORIDE ION
2
1
HYPOPHOSPHITEHYPOPHOSPHITE
3
4
CARBON DIOXIDECARBON DIOXIDE
4
4
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
2
GLYCEROLGLYCEROL
6
3
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
7
1
1,3-PROPANDIOL1,3-PROPANDIOL
8
1
TETRAETHYLENE GLYCOLTETRAETHYLENE GLYCOL
9
1
PENTAETHYLENE GLYCOLPENTAETHYLENE GLYCOL
10
1
[(1S,3R,3aR,6aS)-3-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-5,5-bis(oxidanyl)-1,3,3a,4,6,6a-hexahydrocyclopenta[c]furan-1-yl]methyl [(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] hydrogen phosphate[(1S,3R,3aR,6aS)-3-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-5,5-bis(oxidanyl)-1,3,3a,4,6,6a-hexahydrocyclopenta[c]furan-1-yl]methyl [(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-2-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] hydrogen phosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303