7BGY: Cryo-EM Structure of KdpFABC in E2Pi state with MgF4

PDB ID: 7BGYDownload
MMDB ID: 198008
PDB Deposition Date: 2021/1/9
Updated in MMDB: 2024/07
Experimental Method:
electron microscopy
Resolution: 2.9  Å
Source Organism:
Similar Structures:
Biological Unit for 7BGY: tetrameric; determined by author and by software (PISA)
Molecular Components in 7BGY
Label Count Molecule
Proteins (4 molecules)
1
Potassium-transporting Atpase Potassium-binding Subunit
Molecule annotation
1
Potassium-transporting Atpase Atp-binding Subunit
Molecule annotation
1
Potassium-transporting Atpase Kdpc Subunit
Molecule annotation
1
Potassium-transporting Atpase Kdpf Subunit
(Gene symbol: kdpF)
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE
2
1
(2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate(2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate
3
1
MAGNESIUM IONMAGNESIUM ION
4
1
TETRAFLUOROMAGNESATE(2-)TETRAFLUOROMAGNESATE(2-)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303