7B3D: Structure of elongating SARS-CoV-2 RNA-dependent RNA polymerase with AMP at position -4 (structure 3)

PDB ID: 7B3DDownload
MMDB ID: 196821
PDB Deposition Date: 2020/11/30
Updated in MMDB: 2024/05
Experimental Method:
electron microscopy
Resolution: 2.8  Å
Source Organism:
Similar Structures:
Biological Unit for 7B3D: pentameric; determined by author and by software (PISA)
Molecular Components in 7B3D
Label Count Molecule
Proteins (3 molecules)
1
Sars-cov-2 RNA-dependent RNA Polymerase Nsp12
Molecule annotation
1
Sars-cov-2 Nsp8
Molecule annotation
1
Sars-cov-2 Nsp7
Molecule annotation
Nucleotides(2 molecules)
1
RNA (5'-r(p*cp*up*ap*cp*gp*cp*ap*gp*up*g)-3')
Molecule annotation
1
RNA (5'-r(p*up*gp*cp*ap*cp*up*gp*cp*gp*up*ap*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303