7AP1: Klebsiella pneumoniae Seryl-tRNA synthetase in Complex with Compound SerS7HMDDA

PDB ID: 7AP1Download
MMDB ID: 195134
PDB Deposition Date: 2020/10/15
Updated in MMDB: 2020/12
Experimental Method:
x-ray diffraction
Resolution: 2.18  Å
Source Organism:
Similar Structures:
Biological Unit for 7AP1: dimeric; determined by author and by software (PISA)
Molecular Components in 7AP1
Label Count Molecule
Proteins (2 molecules)
2
Serine-trna Ligase
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
2
[(2~{R},3~{S},4~{R},5~{R})-5-[7-azanyl-5-(hydroxymethyl)benzimidazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-3-oxidanyl-propanoyl]sulfamate[(2~{R},3~{S},4~{R},5~{R})-5-[7-azanyl-5-(hydroxymethyl)benzimidazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-3-oxidanyl-propanoyl]sulfamate
2
6
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
6
CALCIUM IONCALCIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303