6ZXN: Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing nanobodies (Ty1)

PDB ID: 6ZXNDownload
MMDB ID: 193205
PDB Deposition Date: 2020
Updated in MMDB: 2024/10
Experimental Method:
electron microscopy
Resolution: 2.93  Å
Source Organism:
Severe acute respiratory syndrome coronavirus 2▼
Similar Structures:
Biological Unit for 6ZXN: hexameric; determined by author and by software (PISA)
Molecular Components in 6ZXN
Label Count Molecule
Proteins (6 molecules)
3
Spike Glycoprotein
Molecule annotation
3
Nanobody TY1
Molecule annotation
Chemicals and Non-standard biopolymers (63 molecules)
1
63
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303