6ZW1: X-ray structure of Danio rerio histone deacetylase 6 (HDAC6) CD2 in complex with an inhibitor SW101

PDB ID: 6ZW1Download
MMDB ID: 205133
PDB Deposition Date: 2020/7/27
Updated in MMDB: 2021/08
Experimental Method:
x-ray diffraction
Resolution: 1.13  Å
Source Organism:
Similar Structures:
Biological Unit for 6ZW1: monomeric; determined by author and by software (PISA)
Molecular Components in 6ZW1
Label Count Molecule
Protein (1 molecule)
1
Histone Deacetylase 6
(Gene symbol: hdac6)
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
ZINC IONZINC ION
2
1
1-[[4-(oxidanylcarbamoyl)phenyl]methyl]-3,4-dihydro-2~{H}-quinoline-6-carboxamide1-[[4-(oxidanylcarbamoyl)phenyl]methyl]-3,4-dihydro-2~{H}-quinoline-6-carboxamide
3
2
GLYCEROLGLYCEROL
4
2
POTASSIUM IONPOTASSIUM ION
5
2
THIOCYANATE IONTHIOCYANATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303