6ZVK: The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism

PDB ID: 6ZVKDownload
MMDB ID: 199765
PDB Deposition Date: 2020/7/24
Updated in MMDB: 2024/05
Experimental Method:
electron microscopy
Resolution: 3.49  Å
Source Organism:
Halastavi arva RNA virus
Similar Structures:
Biological Unit for 6ZVK: 85-meric; determined by author
Molecular Components in 6ZVK
Label Count Molecule
Proteins (80 molecules)
1
Ribosomal Protein L14
Molecule annotation
1
60S Ribosomal Protein El38
Molecule annotation
1
60S Ribosomal Protein Ul13
Molecule annotation
1
Ul22
Molecule annotation
1
60S Ribosomal Protein El18
Molecule annotation
1
60S Ribosomal Protein El19
Molecule annotation
1
UL3
Molecule annotation
1
60S Ribosomal Protein El20
Molecule annotation
1
El21
Molecule annotation
1
Ribosomal Protein L22
Molecule annotation
1
El14
Molecule annotation
1
Ribosomal Protein L24
Molecule annotation
1
60S Ribosomal Protein Ul23
Molecule annotation
1
Ribosomal Protein L26
Molecule annotation
1
Ul15
Molecule annotation
1
60S Ribosomal Protein L29
Molecule annotation
1
Ribosomal Protein L30
Molecule annotation
1
UL4
Molecule annotation
1
El31
Molecule annotation
1
El32
Molecule annotation
1
El33
Molecule annotation
1
El34
Molecule annotation
1
60S Ribosomal Protein UL2
Molecule annotation
1
Ul29
Molecule annotation
1
60S Ribosomal Protein L36
Molecule annotation
1
Ribosomal Protein L37
Molecule annotation
1
Ribosomal Protein El39
Molecule annotation
1
60S Ribosomal Protein El40
Molecule annotation
1
El42
Molecule annotation
1
60S Ribosomal Protein L5
Molecule annotation
1
Ribosomal Protein El43
Molecule annotation
1
60S Ribosomal Protein El28
Molecule annotation
1
60S Acidic Ribosomal Protein P0
Molecule annotation
1
Ribosomal Protein L10 (Predicted)
Molecule annotation
1
Uncharacterized Protein
Molecule annotation
1
Ribosomal_l6e_n Domain-containing Protein
Molecule annotation
1
60S Ribosomal Protein L6
Molecule annotation
1
Ul30
Molecule annotation
1
60S Ribosomal Protein EL8
Molecule annotation
1
60S Ribosomal Protein UL6
Molecule annotation
1
Ribosomal Protein L10 (Predicted)
Molecule annotation
1
Ribosomal Protein L11
Molecule annotation
1
60S Ribosomal Protein L13
Molecule annotation
1
Ribosomal Protein L15
Molecule annotation
1
60S Ribosomal Protein L27
Molecule annotation
1
Ribosomal Protein
Molecule annotation
1
Ribosomal_s10 Domain-containing Protein
Molecule annotation
1
40S Ribosomal Protein Es30
Molecule annotation
1
Ribosomal Protein S11
Molecule annotation
1
Ribosomal Protein Es28
Molecule annotation
1
40S Ribosomal Protein ES7
Molecule annotation
1
40S Ribosomal Protein Us11
Molecule annotation
1
Ribosomal Protein Us19
Molecule annotation
1
40S Ribosomal Protein US9
Molecule annotation
1
40S Ribosomal Protein Es17
Molecule annotation
1
40S Ribosomal Protein Es21
Molecule annotation
1
Ribosomal Protein Us13
Molecule annotation
1
40S Ribosomal Protein Es19
Molecule annotation
1
Ribosomal Protein S15a
Molecule annotation
1
40S Ribosomal Protein S24
Molecule annotation
1
40S Ribosomal Protein S27
Molecule annotation
1
Ribosomal Protein Es25
Molecule annotation
1
40S Ribosomal Protein Es26
Molecule annotation
1
40S Ribosomal Protein Es31
Molecule annotation
1
Ribosomal Protein Rack1
Molecule annotation
1
Ribosomal Protein S23
Molecule annotation
1
40s_sa_c Domain-containing Protein
Molecule annotation
1
40S Ribosomal Protein S3A
Molecule annotation
1
S5 Drbm Domain-containing Protein
Molecule annotation
1
60S Ribosomal Protein L41
Molecule annotation
1
Ribosomal Protein S3
Molecule annotation
1
40S Ribosomal Protein S4
Molecule annotation
1
Ribosomal Protein S5
Molecule annotation
1
40S Ribosomal Protein S6
Molecule annotation
1
40S Ribosomal Protein S8
Molecule annotation
1
Ribosomal Protein S9 (Predicted)
Molecule annotation
1
40S Ribosomal Protein S12
Molecule annotation
1
Ribosomal Protein Us15
Molecule annotation
1
S10_plectin Domain-containing Protein
Molecule annotation
1
Ribosomal Protein Us14
Molecule annotation
Nucleotides(5 molecules)
1
28S Ribosomal RNA
Molecule annotation
1
5S Ribosomal RNA
Molecule annotation
1
5.8s Ribosomal RNA
Molecule annotation
1
Internal Ribosome Entry Site
Molecule annotation
1
18S Ribosomal RNA
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
6
* Click molecule labels to explore molecular sequence information.

Citing MMDB