6ZOD: Fusidic acid binding to the allosteric deep transmembrane domain binding pocket, TM7/TM8 groove, and TM1/TM2 groove of the fully induced AcrB T protomer

PDB ID: 6ZODDownload
MMDB ID: 202039
PDB Deposition Date: 2020/7/7
Updated in MMDB: 2021/07
Experimental Method:
x-ray diffraction
Resolution: 2.85  Å
Source Organism:
Escherichia coli K-12▼
Similar Structures:
Biological Unit for 6ZOD: pentameric; determined by author and by software (PISA)
Molecular Components in 6ZOD
Label Count Molecule
Proteins (5 molecules)
3
Multidrug Efflux Pump Subunit Acrb
Molecule annotation
2
Darpin
Molecule annotation
Chemicals and Non-standard biopolymers (41 molecules)
1
7
DODECYL-BETA-D-MALTOSIDEDODECYL-BETA-D-MALTOSIDE
2
15
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
2
GLYCEROLGLYCEROL
4
2
DECANEDECANE
5
4
FUSIDIC ACIDFUSIDIC ACID
6
1
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
7
1
OctadecaneOctadecane
8
5
SULFATE IONSULFATE ION
9
2
PHOSPHATIDYLETHANOLAMINEPHOSPHATIDYLETHANOLAMINE
10
1
DODECANEDODECANE
11
1
HEXANEHEXANE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303