6Z79: Variant Surface Glycoprotein VSGsur, I3C ("Magic Triangle") derivative used for phasing of the structure and subsequently as a model for molecular replacement of native, mutants, and drug soaks

PDB ID: 6Z79Download
MMDB ID: 199843
PDB Deposition Date: 2020/5/30
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.92  Å
Source Organism:
Similar Structures:
Biological Unit for 6Z79: dimeric; determined by author and by software (PISA)
Molecular Components in 6Z79
Label Count Molecule
Proteins (2 molecules)
2
Variant Surface Glycoprotein SUR
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
alpha-D-mannopyranosealpha-D-mannopyranose
3
2
5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303