6YX5: Structure of DrrA from Legionella pneumophilia in complex with human Rab8a

PDB ID: 6YX5Download
MMDB ID: 196780
PDB Deposition Date: 2020/4/30
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 2.14  Å
Source Organism:
Homo sapiens▼
Similar Structures:
Biological Unit for 6YX5: dimeric; determined by author and by software (PISA)
Molecular Components in 6YX5
Label Count Molecule
Proteins (2 molecules)
1
Ras-related Protein Rab-8a
Molecule annotation
1
Multifunctional Virulence Effector Protein Drra
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
1
MAGNESIUM IONMAGNESIUM ION
2
1
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
3
3
alpha-D-glucopyranosealpha-D-glucopyranose
4
1
[(2~{R},3~{S},4~{R},5~{R})-5-[4-(acetamidomethyl)-1,2,3-triazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate[(2~{R},3~{S},4~{R},5~{R})-5-[4-(acetamidomethyl)-1,2,3-triazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate
5
5
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303