6YW1: HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with 2OG and RaPID-derived silent allosteric cyclic peptide 3C (14-mer)

PDB ID: 6YW1Download
MMDB ID: 196986
PDB Deposition Date: 2020/4/29
Updated in MMDB: 2024/01
Experimental Method:
x-ray diffraction
Resolution: 1.46  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6YW1: dimeric; determined by author and by software (PISA)
Molecular Components in 6YW1
Label Count Molecule
Proteins (2 molecules)
1
EGL Nine Homolog 1
Molecule annotation
1
Phd2-specific Rapid Cyclic Peptide 3C (14-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
MANGANESE (II) IONMANGANESE (II) ION
2
1
2-OXOGLUTARIC ACID2-OXOGLUTARIC ACID
3
1
BICARBONATE IONBICARBONATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303