6YRP: Crystal Structure of the VIM-2 Acquired Metallo-beta-Lactamase in Complex with JMV-4690 (Cpd 31)

PDB ID: 6YRPDownload
MMDB ID: 193484
PDB Deposition Date: 2020/4/20
Updated in MMDB: 2020/10
Experimental Method:
x-ray diffraction
Resolution: 1.95  Å
Source Organism:
Similar Structures:
Biological Unit for 6YRP: monomeric; determined by author and by software (PISA)
Molecular Components in 6YRP
Label Count Molecule
Protein (1 molecule)
1
Metallo-beta-lactamase Vim-2-like Protein
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
3
ZINC IONZINC ION
2
1
2-[[[3-(5-methoxy-2-oxidanyl-phenyl)-5-sulfanylidene-1~{H}-1,2,4-triazol-4-yl]amino]methyl]benzoic acid2-[[[3-(5-methoxy-2-oxidanyl-phenyl)-5-sulfanylidene-1~{H}-1,2,4-triazol-4-yl]amino]methyl]benzoic acid
3
3
1,2-ETHANEDIOL1,2-ETHANEDIOL
4
2
ACETATE IONACETATE ION
5
1
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303