6YRC: Spectroscopically-validated structure of DtpB from Streptomyces lividans in the ferric state

PDB ID: 6YRCDownload
MMDB ID: 197458
PDB Deposition Date: 2020/4/20
Updated in MMDB: 2024/05
Experimental Method:
x-ray diffraction
Resolution: 1.99  Å
Source Organism:
Similar Structures:
Biological Unit for 6YRC: monomeric; determined by author
Molecular Components in 6YRC
Label Count Molecule
Protein (1 molecule)
1
Putative Iron-dependent Peroxidase
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
1
PROTOPORPHYRIN IX CONTAINING FE (Link to PubChem not yet available)PROTOPORPHYRIN IX CONTAINING FE
2
2
2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL (Link to PubChem not yet available)2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL
3
2
MAGNESIUM ION (Link to PubChem not yet available)MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303