6YJS: Crystal structure of MGAT5 (alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V) luminal domain with a Lys329-Ile345 loop truncation, in complex with biantennary pentasaccharide M592

PDB ID: 6YJSDownload
MMDB ID: 192963
PDB Deposition Date: 2020
Updated in MMDB: 2021/03
Experimental Method:
x-ray diffraction
Resolution: 1.6  Å
Source Organism:
Similar Structures:
Biological Unit for 6YJS: monomeric; determined by author
Molecular Components in 6YJS
Label Count Molecule
Protein (1 molecule)
1
Alpha-1,6-mannosylglycoprotein 6-beta-n-acetylglucosaminyltransferase a
(Gene symbol: MGAT5)
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
2
alpha-D-mannopyranosealpha-D-mannopyranose
2
3
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
3
3
1,2-ETHANEDIOL1,2-ETHANEDIOL
4
6
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303