6YHG: Thrombin in complex with D-Phe-Pro-m-methoxybenzylamide derivative (16a)

PDB ID: 6YHGDownload
MMDB ID: 200587
PDB Deposition Date: 2020/3/29
Updated in MMDB: 2021/10
Experimental Method:
x-ray diffraction
Resolution: 1.33  Å
Source Organism:
Homo sapiens▼
Similar Structures:
Biological Unit for 6YHG: trimeric; determined by author and by software (PISA)
Molecular Components in 6YHG
Label Count Molecule
Proteins (3 molecules)
1
Prothrombin
Molecule annotation
1
Prothrombin
Molecule annotation
1
Hirudin Variant-2
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
1
PHOSPHATE IONPHOSPHATE ION
2
2
SODIUM IONSODIUM ION
3
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
4
1
GLYCEROLGLYCEROL
5
1
D-PHENYLALANINED-PHENYLALANINE
6
1
PROLINEPROLINE
7
1
1-(3-methoxyphenyl)methanamine1-(3-methoxyphenyl)methanamine
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303