6Y8P: Crystal structure of SNAP-tag labeled with a benzyl-tetramethylrhodamine fluorophore

PDB ID: 6Y8PDownload
MMDB ID: 200324
PDB Deposition Date: 2020/3/5
Updated in MMDB: 2021/11
Experimental Method:
x-ray diffraction
Resolution: 2.3  Å
Source Organism:
Similar Structures:
Biological Unit for 6Y8P: monomeric; determined by author and by software (PISA)
Molecular Components in 6Y8P
Label Count Molecule
Protein (1 molecule)
1
O6-alkylguanine-dna Alkyltransferase Mutant
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
ZINC IONZINC ION
2
1
[9-[2-carboxy-5-[(4-methylphenyl)methylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium[9-[2-carboxy-5-[(4-methylphenyl)methylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium
3
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303