6XLP: Structure of the essential inner membrane lipopolysaccharide-PbgA complex

PDB ID: 6XLPDownload
MMDB ID: 191741
PDB Deposition Date: 2020/6/29
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 6XLP: monomeric; determined by author and by software (PISA)
Molecular Components in 6XLP
Label Count Molecule
Protein (1 molecule)
1
LPS Binding Protein
Molecule annotation
Chemicals and Non-standard biopolymers (23 molecules)
1
1
2-deoxy-2-{[(1S,3R)-1-hydroxy-3-(pentanoyloxy)undecyl]amino}-4-O-phosphono-alpha-D-glucopyranose2-deoxy-2-{[(1S,3R)-1-hydroxy-3-(pentanoyloxy)undecyl]amino}-4-O-phosphono-alpha-D-glucopyranose
2
1
2-deoxy-3-O-[(1R,3R)-1,3-dihydroxytetradecyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-alpha-D-glucopyranose2-deoxy-3-O-[(1R,3R)-1,3-dihydroxytetradecyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-1-O-phosphono-alpha-D-glucopyranose
3
1
3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid
4
8
SULFATE IONSULFATE ION
5
8
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate
6
3
TETRAETHYLENE GLYCOLTETRAETHYLENE GLYCOL
7
1
1,2-Distearoyl-sn-glycerophosphoethanolamine1,2-Distearoyl-sn-glycerophosphoethanolamine
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303