6XKI: Crystal structure of eIF4A-I in complex with RNA bound to des-MePateA, a pateamine A analog

PDB ID: 6XKIDownload
MMDB ID: 197131
PDB Deposition Date: 2020/6/26
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.87  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6XKI: dimeric; determined by author and by software (PISA)
Molecular Components in 6XKI
Label Count Molecule
Protein (1 molecule)
1
Eukaryotic Initiation Factor 4a-i
Molecule annotation
Nucleotide(1 molecule)
1
RNA (5'-r(*ap*gp*ap*gp*ap*gp*ap*gp*ap*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
1
MAGNESIUM IONMAGNESIUM ION
3
1
(3S,6Z,8E,11S,15R)-15-amino-3-[(1E,3E,5E)-7-(dimethylamino)-2,5-dimethylhepta-1,3,5-trien-1-yl]-9,11-dimethyl-4,12-dioxa-20-thia-21-azabicyclo[16.2.1]henicosa-1(21),6,8,18-tetraene-5,13-dione(3S,6Z,8E,11S,15R)-15-amino-3-[(1E,3E,5E)-7-(dimethylamino)-2,5-dimethylhepta-1,3,5-trien-1-yl]-9,11-dimethyl-4,12-dioxa-20-thia-21-azabicyclo[16.2.1]henicosa-1(21),6,8,18-tetraene-5,13-dione
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303